Package: Cyclops 3.5.0
Cyclops: Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
This model fitting tool incorporates cyclic coordinate descent and majorization-minimization approaches to fit a variety of regression models found in large-scale observational healthcare data. Implementations focus on computational optimization and fine-scale parallelization to yield efficient inference in massive datasets. Please see: Suchard, Simpson, Zorych, Ryan and Madigan (2013) <doi:10.1145/2414416.2414791>.
Authors:
Cyclops_3.5.0.tar.gz
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Cyclops.pdf |Cyclops.html✨
Cyclops/json (API)
NEWS
# Install 'Cyclops' in R: |
install.packages('Cyclops', repos = c('https://ohdsi.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ohdsi/cyclops/issues
- oxford - Oxford self-controlled case series data
Last updated 5 days agofrom:997098c1a4. Checks:OK: 9. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 01 2024 |
R-4.5-win-x86_64 | OK | Nov 01 2024 |
R-4.5-linux-x86_64 | OK | Nov 01 2024 |
R-4.4-win-x86_64 | OK | Nov 01 2024 |
R-4.4-mac-x86_64 | OK | Nov 01 2024 |
R-4.4-mac-aarch64 | OK | Nov 01 2024 |
R-4.3-win-x86_64 | OK | Nov 01 2024 |
R-4.3-mac-x86_64 | OK | Nov 01 2024 |
R-4.3-mac-aarch64 | OK | Nov 01 2024 |
Exports:aconfintconvertToCyclopsDataconvertToTimeVaryingCoefcoveragecreateAutoGridCrossValidationControlcreateControlcreateCyclopsDatacreateNonSeparablePriorcreateParameterizedPriorcreatePriorcreateWeightBasedSearchControlfinalizeSqlCyclopsDatafitCyclopsModelfitCyclopsSimulationgetCovariateIdsgetCovariateTypesgetCyclopsProfileLogLikelihoodgetFineGrayWeightsgetFloatingPointSizegetHyperParametergetNumberOfCovariatesgetNumberOfRowsgetNumberOfStratagetUnivariableCorrelationgetUnivariableSeparabilityisInitializedlistGPUDevicesmeanLinearPredictormseMultitypereadCyclopsDatarunBootstrapsetOpenCLDevicesimulateCyclopsDatasplitTime
Dependencies:Andromedabitbit64blobcachemclicpp11DBIdbplyrdplyrfansifastmapgenericsgluehmslatticelifecyclemagrittrMatrixmemoisepillarpkgconfigplogrpurrrR6RcppRcppEigenRcppParallelrlangRSQLitestringistringrsurvivaltibbletidyrtidyselectutf8vctrswithrzip