{ "_id": "6a4f3ee921b18e15484ff9d5", "Package": "PatientGenerator", "Type": "Package", "Title": "Generator of Synthetic Patient Data for the OMOP Common Data\nModel", "Version": "0.1.4", "Authors@R": "c(\nperson(\"Cesar\", \"Barboza\", , \"c.barboza@mi-erasmusmc.nl\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0009-0002-4453-3071\")),\nperson(\"Ger\", \"Inberg\", , \"g.inberg@erasmusmc.nl\", role = \"aut\", comment = c(ORCID = \"0000-0001-8993-8748\")),\nperson(\"Adam\", \"Black\", , \"black@ohdsi.org\", role = \"aut\", comment = c(ORCID = \"0000-0001-5576-8701\"))\n)", "Description": "Tools to generate synthetic patient-level test datasets in\nthe Observational Medical Outcomes Partnership (OMOP) Common\nData Model (CDM). Includes a chat-driven generator backed by\nlarge language models and an interactive 'shiny' designer for\nediting CDM test sets.", "URL": "https://github.com/mi-erasmusmc/PatientGenerator,\nhttps://mi-erasmusmc.github.io/PatientGenerator/", "BugReports": "https://github.com/mi-erasmusmc/PatientGenerator/issues", "License": "Apache License (>= 2)", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/Needs/website": "pkgdown", "Config/testthat/edition": "3", "Repository": "https://ohdsi.r-universe.dev", "Date/Publication": "2026-04-27 10:00:49 UTC", "RemoteUrl": "https://github.com/ohdsi/patientgenerator", "RemoteRef": "HEAD", "RemoteSha": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-09 06:22:17 UTC", "User": "root" }, "Author": "Cesar Barboza [aut, cre] (ORCID:\n),\nGer Inberg [aut] (ORCID: ),\nAdam Black [aut] (ORCID: )", "Maintainer": "Cesar Barboza ", "_user": "ohdsi", "_type": "src", "_file": "PatientGenerator_0.1.4.tar.gz", "_fileid": "https://r2.ropensci.org/d2d641e955c9ee1f79c31a8fd01e51b6266eef4fe33fc7c5f91d2b66ea155f7a", "_filesize": 549113, "_sha256": "d2d641e955c9ee1f79c31a8fd01e51b6266eef4fe33fc7c5f91d2b66ea155f7a", "_expires": "2026-10-17T06:25:43.000Z", "_created": "2026-07-09T06:22:17.000Z", "_published": "2026-07-09T06:25:45.608Z", "_jobs": [ { "job": 86053394553, "time": 162, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8190682964" }, { "job": 86053394556, "time": 165, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8190684132" }, { "job": 86053394574, "time": 91, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "8190663880" }, { "job": 86053394546, "time": 131, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8190674955" }, { "job": 86052879067, "time": 221, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8190636229" }, { "job": 86053394542, "time": 147, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8190678503" }, { "job": 86053394587, "time": 109, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "8190669111" }, { "job": 86053394589, "time": 125, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "8190674085" }, { "job": 86053394579, "time": 122, "config": "windows-release", "r": "4.6.1", "check": "OK", "artifact": "8190674263" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390", "_status": "success", "_upstream": "https://github.com/ohdsi/patientgenerator", "_commit": { "id": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "author": "CE Barboza <113351542+cebarboza@users.noreply.github.com>", "committer": "GitHub ", "message": "Merge pull request #42 from mi-erasmusmc/develop\n\nCRAN submission no logo", "time": 1777284049 }, "_maintainer": { "name": "Cesar Barboza", "email": "c.barboza@mi-erasmusmc.nl", "login": "cebarboza", "description": "R developer for the Department of Medical Informatics at Erasmus MC", "uuid": 113351542 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "bslib", "role": "Imports" }, { "package": "checkmate", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "DBI", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "DT", "role": "Imports" }, { "package": "duckdb", "role": "Imports" }, { "package": "ellmer", "role": "Imports" }, { "package": "glue", "role": "Imports" }, { "package": "httr2", "role": "Imports" }, { "package": "jsonlite", "role": "Imports" }, { "package": "r2d3", "role": "Imports" }, { "package": "R6", "role": "Imports" }, { "package": "shiny", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "testthat", "role": "Imports" }, { "package": "CDMConnector", "role": "Suggests" }, { "package": "CohortCharacteristics", "role": "Suggests" }, { "package": "CohortConstructor", "role": "Suggests" }, { "package": "covr", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "TestGenerator", "role": "Suggests" } ], "_owner": "ohdsi", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-09", "n": 9 }, { "week": "2026-16", "n": 4 }, { "week": "2026-18", "n": 7 } ], "_tags": [ { "name": "v0.1.3", "date": "2026-04-27" }, { "name": "v0.1.4", "date": "2026-04-27" } ], "_stars": 3, "_contributors": [ { "user": "cebarboza", "count": 20, "uuid": 113351542 } ], "_userbio": { "uuid": 6570077, "type": "organization", "name": "Observational Health Data Sciences and Informatics", "followers": 1047 }, "_downloads": { "count": 220, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/PatientGenerator" }, "_devurl": "https://github.com/mi-erasmusmc/patientgenerator", "_searchresults": 5, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/PatientGenerator.html", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/ohdsi/patientgenerator", "_realowner": "ohdsi", "_cranurl": true, "_releases": [ { "version": "0.1.4", "date": "2026-05-04" } ], "_exports": [ "%||%", "availableModels", "conceptSearchServer", "conceptSearchUI", "getTestSets", "hecateClient", "hecateSearch", "patientChat", "patientChatNaive", "patientDesigner" ], "_help": [ { "page": "availableModels", "title": "'availableModels()' If the API key is valid in the system, returns available models to the user from the LLM provider.", "topics": [ "availableModels" ] }, { "page": "conceptSearchModule", "title": "Concept search Shiny module", "topics": [ "conceptSearchModule", "conceptSearchServer", "conceptSearchUI" ] }, { "page": "getTestSets", "title": "Useful to list available datasets in the testCases folder", "topics": [ "getTestSets" ] }, { "page": "hecateClient", "title": "Create a Hecate API client", "topics": [ "hecateClient" ] }, { "page": "hecateSearch", "title": "Search Hecate concepts and return results as a data frame", "topics": [ "hecateSearch" ] }, { "page": "nullOr", "title": "Null coalescing operator", "topics": [ "%||%", "nullOr" ] }, { "page": "patientChat", "title": "'patientChat()' generates synthetic patients in the OMOP-CDM using an LLM API.", "topics": [ "patientChat" ] }, { "page": "patientChatNaive", "title": "'patientChatNaive()' is a grapper for the ellmer package to send prompts and send the output test set to an LLM. Requires a valid API key.", "topics": [ "patientChatNaive" ] }, { "page": "patientDesigner", "title": "'patientDesigner()' is a visual interface based on D3 to construct test datasets for the OMOP-CDM", "topics": [ "patientDesigner" ] } ], "_readme": "https://github.com/ohdsi/patientgenerator/raw/HEAD/README.md", "_rundeps": [ "askpass", "backports", "base64enc", "brio", "bslib", "cachem", "callr", "checkmate", "cli", "commonmark", "coro", "crayon", "crosstalk", "curl", "data.table", "DBI", "desc", "diffobj", "digest", "dplyr", "DT", "duckdb", "ellmer", "evaluate", "fastmap", "fontawesome", "fs", "generics", "glue", "highr", "htmltools", "htmlwidgets", "httpuv", "httr2", "jquerylib", "jsonlite", "knitr", "later", "lazyeval", "lifecycle", "magrittr", "memoise", "mime", "openssl", "otel", "pillar", "pkgbuild", "pkgconfig", "pkgload", "praise", "processx", "promises", "ps", "r2d3", "R6", "rappdirs", "Rcpp", "rlang", "rmarkdown", "rprojroot", "rstudioapi", "S7", "sass", "shiny", "sourcetools", "stringi", "stringr", "sys", "testthat", "tibble", "tidyselect", "tinytex", "utf8", "vctrs", "waldo", "withr", "xfun", "xtable", "yaml" ], "_vignettes": [ { "source": "shiny-integration.Rmd", "filename": "shiny-integration.html", "title": "Interactive Patient Designer & Test Integration", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Operating the Patient Designer", "Saving Test Sets for testthat Integration", "Integrating with testthat" ], "created": "2026-04-27 00:32:30", "modified": "2026-04-27 00:32:30", "commits": 1 } ], "_score": 4.653212513775344, "_indexed": true, "_nocasepkg": "patientgenerator", "_universes": [ "ohdsi", "cebarboza", "mi-erasmusmc" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.4", "date": "2026-07-09T06:24:52.000Z", "distro": "resolute", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/4bf182977631db6645a886a6337c359851db74ba1c2768fd004e66f5e2b18b5f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.6.1", "os": "linux", "version": "0.1.4", "date": "2026-07-09T06:24:50.000Z", "distro": "resolute", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/386d6f2729f8d41858951999c080f91b55acc41b0157411e978a3d11aa5ed17c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.5.3", "os": "mac", "version": "0.1.4", "date": "2026-07-09T06:23:52.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/6a3d588338c0865ee6ed94031cb63dcde625cb3b419d1eb8cbe163d98da6a534", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.6.1", "os": "mac", "version": "0.1.4", "date": "2026-07-09T06:24:23.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/afd4a18464953729c5466270cdfa3097f46ce13fb124a398c54aba106316518f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.4", "date": "2026-07-09T06:25:00.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/4014376f337969de3c99199709482237e82964c6cc3be99b1adff32e15d1845d", "status": "success", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.7.0", "os": "win", "version": "0.1.4", "date": "2026-07-09T06:23:50.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/6448372319dedddb5b71a00bcff0ae739ea93017892733a3db9680b2a134aa2d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.5.3", "os": "win", "version": "0.1.4", "date": "2026-07-09T06:24:09.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/2aad498e4e8e1ce55bda51ee96669ee1a05f179614406059a78d89c1d262c4b1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" }, { "r": "4.6.1", "os": "win", "version": "0.1.4", "date": "2026-07-09T06:24:14.000Z", "commit": "472cfeb3617c0a2caa4f9402f4becf8a60873692", "fileid": "https://r2.ropensci.org/4af9fe6fdeef5cf35708d61f8752ab55065425b666fc433fcd4ae9d439ab9ecd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/28998333390" } ] }