{ "_id": "6a14236dacfb0bcc41d3f00f", "Package": "CirceR", "Type": "Package", "Title": "Construct Cohort Inclusion and Restriction Criteria Expressions", "Version": "1.3.3", "Date": "2024-03-20", "Authors@R": "c(\nperson(\"Chris\", \"Knoll\", , \"cknoll@ohdsi.org\", role = c(\"aut\", \"cre\")),\nperson(\"Martijn\", \"Schuemie\", role = c(\"aut\"))\n)", "Maintainer": "Chris Knoll ", "Description": "Wraps the 'CIRCE' ()\n'Java' library allowing cohort definition expressions to be\nedited and converted to 'Markdown' or 'SQL'.", "License": "Apache License 2.0", "URL": "https://ohdsi.github.io/CirceR/, https://github.com/OHDSI/CirceR/", "BugReports": "https://github.com/OHDSI/CirceR/issues/", "SystemRequirements": "Java (>= 8)", "NeedsCompilation": "no", "RoxygenNote": "7.3.1", "Language": "en-US", "Encoding": "UTF-8", "Config/pak/sysreqs": "make default-jdk", "Repository": "https://ohdsi.r-universe.dev", "Date/Publication": "2024-04-23 13:04:17 UTC", "RemoteUrl": "https://github.com/ohdsi/circer", "RemoteRef": "HEAD", "RemoteSha": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "Packaged": { "Date": "2026-05-25 10:21:50 UTC", "User": "root" }, "Author": "Chris Knoll [aut, cre],\nMartijn Schuemie [aut]", "MD5sum": "70f8e7d8c41d26bce4229154e3ca1e25", "_user": "ohdsi", "_type": "src", "_file": "CirceR_1.3.3.tar.gz", "_fileid": "03d34ee88da44534671136294e908eaf592e9fa2793754a5509303a98e1c2607", "_filesize": 4404047, "_sha256": "03d34ee88da44534671136294e908eaf592e9fa2793754a5509303a98e1c2607", "_created": "2026-05-25T10:21:50.000Z", "_published": "2026-05-25T10:24:45.318Z", "_distro": "noble", "_jobs": [ { "job": 77695442459, "time": 137, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7196342169" }, { "job": 77695442502, "time": 120, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7196338082" }, { "job": 77695442589, "time": 88, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7196330639" }, { "job": 77695442457, "time": 79, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7196328352" }, { "job": 77695086185, "time": 170, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7196307306" }, { "job": 77695442426, "time": 110, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7196335587" }, { "job": 77695442471, "time": 96, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7196333395" }, { "job": 77695442485, "time": 75, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7196327429" }, { "job": 77695442477, "time": 79, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7196328532" } ], "_buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/ohdsi/circer", "_commit": { "id": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "author": "Chris Knoll ", "committer": "GitHub ", "message": "Release 1.3.3 [Part 2] (#46)\n\n* Additional updates for CRAN submission.\r\n* Regenerated documentation.\r\n", "time": 1713877457 }, "_maintainer": { "name": "Chris Knoll", "email": "cknoll@ohdsi.org", "login": "chrisknoll", "description": "", "uuid": 6818777 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "rJava", "role": "Imports" }, { "package": "RJSONIO", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "ohdsi", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_topics": [ "hades", "openjdk" ], "_stars": 6, "_contributors": [ { "user": "chrisknoll", "count": 41, "uuid": 6818777 }, { "user": "schuemie", "count": 3, "uuid": 6713328 } ], "_userbio": { "uuid": 6570077, "type": "organization", "name": "Observational Health Data Sciences and Informatics" }, "_downloads": { "count": 813, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CirceR" }, "_devurl": "https://github.com/ohdsi/circer", "_pkgdown": "https://ohdsi.github.io/CirceR/", "_searchresults": 96, "_rbuild": "4.6.0", "_assets": [ "extra/CirceR.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/ohdsi/circer", "_realowner": "ohdsi", "_cranurl": true, "_releases": [ { "version": "1.3.3", "date": "2024-04-18" } ], "_exports": [ "buildCohortQuery", "buildConceptSetQuery", "cohortExpressionFromJson", "cohortPrintFriendly", "conceptSetExpressionFromJson", "conceptSetListPrintFriendly", "conceptSetPrintFriendly", "createGenerateOptions" ], "_datasets": [ { "name": "cohortDefinitionJson", "title": "An example cohort definition", "object": "cohortDefinitionJson", "file": "cohortDefinitionJson.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "conceptSetJson", "title": "An example concept set", "object": "conceptSetJson", "file": "conceptSetJson.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true }, { "name": "conceptSetListJson", "title": "An example concept set list", "object": "conceptSetListJson", "file": "conceptSetListJson.rda", "class": [ "character" ], "fields": [], "table": false, "tojson": true } ], "_help": [ { "page": "buildCohortQuery", "title": "Build cohort SQL", "topics": [ "buildCohortQuery" ] }, { "page": "buildConceptSetQuery", "title": "Build conceptset SQL", "topics": [ "buildConceptSetQuery" ] }, { "page": "cohortDefinitionJson", "title": "An example cohort definition", "topics": [ "cohortDefinitionJson" ] }, { "page": "cohortExpressionFromJson", "title": "Render read JSON into a CohortExpression instance", "topics": [ "cohortExpressionFromJson" ] }, { "page": "cohortPrintFriendly", "title": "Render cohort print-friendly", "topics": [ "cohortPrintFriendly" ] }, { "page": "conceptSetExpressionFromJson", "title": "Render read JSON into a ConceptSetExpression instance", "topics": [ "conceptSetExpressionFromJson" ] }, { "page": "conceptSetJson", "title": "An example concept set", "topics": [ "conceptSetJson" ] }, { "page": "conceptSetListJson", "title": "An example concept set list", "topics": [ "conceptSetListJson" ] }, { "page": "conceptSetListPrintFriendly", "title": "Render conceptSet array for print-friendly", "topics": [ "conceptSetListPrintFriendly" ] }, { "page": "conceptSetPrintFriendly", "title": "Render conceptSet array for print-friendly", "topics": [ "conceptSetPrintFriendly" ] }, { "page": "createGenerateOptions", "title": "Create Generation Options", "topics": [ "createGenerateOptions" ] } ], "_readme": "https://github.com/ohdsi/circer/raw/HEAD/README.md", "_rundeps": [ "rJava", "RJSONIO" ], "_sysdeps": [ { "shlib": "libjvm", "package": "openjdk-21-jre-headless", "headers": "openjdk-21-jre-headless", "source": "openjdk", "version": "21.0.10+7-1~24.04", "name": "openjdk", "homepage": "https://openjdk.java.net/", "description": "OpenJDK Java runtime, using Hotspot JIT (headless)" } ], "_score": 4.936513742478893, "_indexed": true, "_nocasepkg": "circer", "_universes": [ "ohdsi", "chrisknoll" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.3.3", "date": "2026-05-25T10:24:09.000Z", "distro": "noble", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "a73397d290fac77be1e7053bf9924e2fdcbaecb07290a3299dd78c49a5706d26", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.6.0", "os": "linux", "version": "1.3.3", "date": "2026-05-25T10:23:54.000Z", "distro": "noble", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "2b1d0e5635a387eb1a3cbadff0a19ea2faab95408daaf01ddccd13fb50d86734", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.5.3", "os": "mac", "version": "1.3.3", "date": "2026-05-25T10:23:28.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "1159522048f5b1851d07bf38da382286b56806ee98fd9a77283e0f9f7658ff8c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.6.0", "os": "mac", "version": "1.3.3", "date": "2026-05-25T10:23:18.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "4c2eadeffa893ec66d6aac9c09210f4ac8bd203e6bf51a296788f78b2708d437", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.6.0", "os": "wasm", "version": "1.3.3", "date": "2026-05-25T10:23:59.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "35f0b692c77175468a353388ad9498a1b744fa7878df41963566b5b470b660f3", "status": "success", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.7.0", "os": "win", "version": "1.3.3", "date": "2026-05-25T10:23:27.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "a76ed1eceee5f98fcb35c3e0813af7989c1a8d935b51ff93055269118e003859", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.5.3", "os": "win", "version": "1.3.3", "date": "2026-05-25T10:22:59.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "c623f79a5edffcd6f2bafc19b16a57f22e3f85f625a9d3e2d87a5fca61708adf", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" }, { "r": "4.6.0", "os": "win", "version": "1.3.3", "date": "2026-05-25T10:23:08.000Z", "commit": "30303ec28bfd3bd4deffc9f84e7b8f9ddbf93c77", "fileid": "64e0d44b15ee2161b3a9a58917d6074b0cb6bf63b95e6b0ebd9b7e41eca61483", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/ohdsi/actions/runs/26395481344" } ] }